STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A1Tricarboxylate transport protein, mitochondrial; Belongs to the mitochondrial carrier (TC 2.A.29) family. (310 aa)    
Predicted Functional Partners:
CS
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.938
POLE2
DNA polymerase epsilon subunit 2.
   
   0.769
DRG1
Developmentally-regulated GTP-binding protein 1.
    
   0.757
CUNHXorf56
UPF0428 protein CXorf56.
    
   0.757
GRN
Granulin.
    
   0.757
CUNH15orf40
Chromosome unknown C15orf40 homolog.
    
   0.757
MRPL40
39S ribosomal protein L40, mitochondrial.
      
 0.658
ACLY
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 
 0.652
SLC25A5
ADP/ATP translocase 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.632
SLC25A4
ADP/ATP translocase 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.632
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.