STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC6Homeobox protein Hox-C6. (259 aa)    
Predicted Functional Partners:
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
0.979
HOXB7
Homeobox protein HoxA/B7.
   
 
0.722
HOXA7
Homeobox protein Hox-A7.
   
  
0.662
HOXB6
Homeobox protein Hox-B6.
   
  
0.660
HOXB3
Homeobox protein Hox-B3.
   
  
0.603
HOXD4
Homeobox protein Hox-D4.
   
  
0.592
HOXA6
Homeobox protein Hox-A6.
   
  
0.559
PANX2
Pannexin-2; Belongs to the pannexin family.
      
 0.459
PBX3
Pre-B-cell leukemia transcription factor 3.
    
 0.404
PBX1
Pre-B-cell leukemia transcription factor 1.
    
 0.404
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.