Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HOXC9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (265 aa)    
Predicted Functional Partners:
HOXC6
Homeobox protein Hox-C6.
   
 
 0.973
HOXD9
Homeobox protein Hox-D9.
   
   0.825
PBX3
Pre-B-cell leukemia transcription factor 3.
    
 
 0.731
PBX1
Pre-B-cell leukemia transcription factor 1.
    
 
 0.731
PBX4
Pre-B-cell leukemia transcription factor 4.
    
 
 0.731
HOXB6
Homeobox protein Hox-B6.
   
 
 0.710
ENSLSDP00000023599
annotation not available
    
 
 0.686
MEIS2
Homeobox protein Meis2.
    
 
 0.686
DMRTA2
Doublesex- and mab-3-related transcription factor 4/5.
    
 
 0.612
MKX
Homeobox protein Mohawk.
    
 
 0.594
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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