Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCLK3Serine/threonine-protein kinase DCLK3. (815 aa)    
Predicted Functional Partners:
CRYM
Ketimine reductase mu-crystallin.
   
  
 0.592
EPB41L1
Band 4.1-like protein 1 isoform X2.
     
 0.576
ENSLSDP00000004915
annotation not available
      
 0.566
TADA3
Transcriptional adapter 3.
    
 
 0.538
ZNF292
Zinc finger protein 292.
    
 
 0.529
DCX
Neuronal migration protein doublecortin.
 
  
 
0.525
ENSLSDP00000023380
annotation not available
      
 0.525
PAQR5
Progestin and adipoQ receptor family member 6.
      
 0.525
SUPT3H
Transcription initiation protein SPT3.
   
  
 0.515
NEDD1
Protein NEDD1.
      
 0.469
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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