STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110480512Conserved oligomeric Golgi complex subunit 1. (953 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.973
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.966
COG2
Conserved oligomeric Golgi complex subunit 2.
   
 0.964
COG7
Conserved oligomeric Golgi complex subunit 7.
    
 0.962
COG3
Conserved oligomeric Golgi complex subunit 3.
   
 0.957
COG5
Conserved oligomeric Golgi complex subunit 5.
    
 0.940
COG4
Conserved oligomeric Golgi complex subunit 4.
    
 0.937
ENSLSDP00000020490
annotation not available
    
 0.911
SMIM7
Small integral membrane protein 7.
    
 0.870
STX16
Syntaxin-16; Belongs to the syntaxin family.
   
 
 0.780
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.