STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDT5ADP-sugar pyrophosphatase; Belongs to the Nudix hydrolase family. (168 aa)    
Predicted Functional Partners:
NUDT9
ADP-ribose pyrophosphatase, mitochondrial.
    
 0.959
PRPS2
Ribose-phosphate pyrophosphokinase 2.
  
 
 0.909
PRPS1
Ribose-phosphate pyrophosphokinase 1.
  
 
 0.909
PGM1
Phosphoglucomutase-1; Belongs to the phosphohexose mutase family.
   
 
 0.908
PGM2
Phosphoglucomutase-2.
  
 
  0.902
ADPRM
Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase.
    
 0.901
NUDT15
Putative 8-oxo-dGTP diphosphatase NUDT15.
  
 
 0.743
DCP1A
mRNA-decapping enzyme 1A.
    
 0.711
DCP1B
mRNA-decapping enzyme 1B.
    
 0.711
EDC4
Enhancer of mRNA-decapping protein 4.
    
 0.677
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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