Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CDC123Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family. (451 aa)    
Predicted Functional Partners:
NUDT5
ADP-sugar pyrophosphatase; Belongs to the Nudix hydrolase family.
   
 
 0.928
EIF2S2
Eukaryotic translation initiation factor 2 subunit 2.
    
 
 0.927
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3.
    
 
 0.924
EIF2S1
Eukaryotic translation initiation factor 2 subunit 1.
   
 
 0.856
RANBP3L
Ran-binding protein 3-like.
   
  
 0.727
MRPS23
28S ribosomal protein S23, mitochondrial.
   
  
 0.618
EEFSEC
Selenocysteine-specific elongation factor.
    
 
 0.617
CDKAL1
Threonylcarbamoyladenosine tRNA methylthiotransferase.
    
 
 0.609
RNF8
E3 ubiquitin-protein ligase RNF8.
    
 
 0.571
RABEP1
Rab GTPase-binding effector protein 1.
      
 0.568
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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