Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110484684Ubiquitin-like protein 5. (71 aa)    
Predicted Functional Partners:
MFAP1
Microfibrillar-associated protein 1.
    
 0.904
SART1
U4/U6.U5 tri-snRNP-associated protein 1.
    
 0.902
ELOB
Transcription elongation factor B polypeptide 2.
   
  
 0.828
ZMAT2
Zinc finger matrin-type protein 2.
   
 0.803
SF3B5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
   0.772
SMU1
WD40 repeat-containing protein SMU1.
    
 0.767
PRPF6
Pre-mRNA-processing factor 6.
    
 0.765
CDC40
Pre-mRNA-processing factor 17.
    
 0.760
NEDD8
Ubiquitin-like protein Nedd8.
   
  
 0.757
WBP11
WW domain-binding protein 11.
    
  0.756
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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