Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BEND7BEN domain-containing protein 7. (429 aa)    
Predicted Functional Partners:
LYPD6B
Ly6/PLAUR domain-containing protein 6B.
      
 0.872
SMIM12
Small integral membrane protein 12.
      
 0.729
TATDN3
Putative deoxyribonuclease TATDN3.
      
 0.725
BEND6
BEN domain-containing protein 6.
      
 0.722
RPS6KC1
Ribosomal protein S6 kinase delta-1.
      
 0.705
TCAIM
T-cell activation inhibitor, mitochondrial.
      
 0.673
ENSLSDP00000011889
annotation not available
      
 0.663
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
      
 0.600
SNAPC3
snRNA-activating protein complex subunit 3.
      
 0.590
OPTN
Optineurin.
      
 0.589
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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