STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHBProhibitin. (272 aa)    
Predicted Functional Partners:
PHB2
Prohibitin.
  
0.999
SPG7
Paraplegin.
   
 0.922
AFG3L2
AFG3-like protein 2.
   
 0.921
YME1L1
ATP-dependent zinc metalloprotease YME1L1.
   
 0.847
STOML2
Stomatin-like protein 2, mitochondrial.
   
 
 0.832
PMPCA
Mitochondrial-processing peptidase subunit alpha.
  
 0.807
RAF1
RAF proto-oncogene serine/threonine-protein kinase.
    
 0.750
C1QBP
Complement C1q binding protein.
   
 0.728
YWHAB
14-3-3 protein beta/alpha; Belongs to the 14-3-3 family.
    
 0.713
ATP23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.703
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.