STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin-10. (277 aa)    
Predicted Functional Partners:
COLEC11
Collectin-11.
  
0.854
MASP2
Mannan-binding lectin serine protease 2.
    
 0.732
MASP1
Mannan-binding lectin serine protease 1; Belongs to the peptidase S1 family.
    
 0.655
ENSLSDP00000020135
annotation not available
    
 0.626
C1QB
Complement C1q subcomponent subunit B.
  
  0.548
ENSLSDP00000015473
annotation not available
  
 
  0.534
ENSLSDP00000022436
annotation not available
  
 
  0.534
COL9A1
Collagen alpha-1(IX) chain.
  
 
  0.531
ENSLSDP00000011214
annotation not available
  
 
  0.527
ENSLSDP00000001401
annotation not available
  
 
  0.522
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.