STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11BTumor necrosis factor receptor superfamily member 11B. (538 aa)    
Predicted Functional Partners:
TNFSF11
Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family.
   
 0.998
CD40LG
CD40 ligand; Belongs to the tumor necrosis factor family.
   
 0.878
ENSLSDP00000003383
Tumor necrosis factor superfamily, member 2.
   
 0.816
TNFRSF11A
Tumor necrosis factor receptor superfamily member 11A.
   
0.568
TNFSF10
Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family.
      
 0.562
TNFRSF13C
Uncharacterized protein.
   
 
 0.527
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
      
 0.521
CD86
T-lymphocyte activation antigen CD86.
   
  
 0.433
GRB2
Growth factor receptor-bound protein 2.
   
 
 0.402
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.