STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000004915annotation not available (251 aa)    
Predicted Functional Partners:
THOC1
THO complex subunit 1.
    
 0.990
THOC5
THO complex subunit 5.
   
 0.987
THOC3
THO complex subunit 3.
   
 0.985
THOC2
THO complex subunit 2.
    
 0.984
THOC7
THO complex subunit 7.
    
 0.984
DDX39B
Spliceosome RNA helicase Ddx39b.
   
 0.954
ZC3H13
Zinc finger CCCH domain-containing protein 13.
    
 0.926
ALYREF
THO complex subunit 4.
   
 0.885
POLDIP3
Polymerase delta-interacting protein 3.
   
 0.800
SARNP
SAP domain-containing ribonucleoprotein.
     
 0.735
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.