VDR protein (Lonchura striata) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

VDR

Vitamin D3 receptor. (456 aa)

Predicted Functional Partners:

MED1

0.882

NCOA3

0.797

NCOA1_1

0.797

NCOA2

0.797

RXRA

0.730

RXRG

0.730

RXRB

0.730

NR1D2

0.730

NCOR2

0.700

NCOR1

0.700

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MED1	NCOA1_1	ENSLSDP00000010349	ENSLSDP00000025183	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor coactivator 1.	0.646
MED1	NCOA2	ENSLSDP00000010349	ENSLSDP00000025824	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor coactivator.	0.646
MED1	NCOA3	ENSLSDP00000010349	ENSLSDP00000021465	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor coactivator 3.	0.646
MED1	NCOR1	ENSLSDP00000010349	ENSLSDP00000012950	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor corepressor 1.	0.608
MED1	NCOR2	ENSLSDP00000010349	ENSLSDP00000007519	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor corepressor 2.	0.608
MED1	NR1D2	ENSLSDP00000010349	ENSLSDP00000019310	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Nuclear receptor subfamily 1 group D member 2.	0.806
MED1	RXRA	ENSLSDP00000010349	ENSLSDP00000003935	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoic acid receptor RXR-alpha.	0.746
MED1	RXRB	ENSLSDP00000010349	ENSLSDP00000014877	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoic acid receptor RXR-alpha-B.	0.746
MED1	RXRG	ENSLSDP00000010349	ENSLSDP00000013131	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoic acid receptor RXR-gamma.	0.746
MED1	VDR	ENSLSDP00000010349	ENSLSDP00000004929	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Vitamin D3 receptor.	0.882
NCOA1_1	MED1	ENSLSDP00000025183	ENSLSDP00000010349	Nuclear receptor coactivator 1.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.646
NCOA1_1	NCOR1	ENSLSDP00000025183	ENSLSDP00000012950	Nuclear receptor coactivator 1.	Nuclear receptor corepressor 1.	0.515
NCOA1_1	NCOR2	ENSLSDP00000025183	ENSLSDP00000007519	Nuclear receptor coactivator 1.	Nuclear receptor corepressor 2.	0.515
NCOA1_1	NR1D2	ENSLSDP00000025183	ENSLSDP00000019310	Nuclear receptor coactivator 1.	Nuclear receptor subfamily 1 group D member 2.	0.730
NCOA1_1	RXRA	ENSLSDP00000025183	ENSLSDP00000003935	Nuclear receptor coactivator 1.	Retinoic acid receptor RXR-alpha.	0.748
NCOA1_1	RXRB	ENSLSDP00000025183	ENSLSDP00000014877	Nuclear receptor coactivator 1.	Retinoic acid receptor RXR-alpha-B.	0.748
NCOA1_1	RXRG	ENSLSDP00000025183	ENSLSDP00000013131	Nuclear receptor coactivator 1.	Retinoic acid receptor RXR-gamma.	0.748
NCOA1_1	VDR	ENSLSDP00000025183	ENSLSDP00000004929	Nuclear receptor coactivator 1.	Vitamin D3 receptor.	0.797
NCOA2	MED1	ENSLSDP00000025824	ENSLSDP00000010349	Nuclear receptor coactivator.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.646
NCOA2	NCOR1	ENSLSDP00000025824	ENSLSDP00000012950	Nuclear receptor coactivator.	Nuclear receptor corepressor 1.	0.515