Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNAI2Dynein intermediate chain 2, axonemal. (712 aa)    
Predicted Functional Partners:
DNALI1
Axonemal dynein light intermediate polypeptide 1.
   
 
 0.964
GAS8
Growth arrest-specific protein 8.
  
 
 0.946
DNAI1
Dynein intermediate chain 1, axonemal.
  
 
 0.931
CCDC65
Coiled-coil domain-containing protein 65.
   
 0.925
RSPH9
Radial spoke head protein 9.
   
 
 0.922
CCDC39
Coiled-coil domain-containing protein 39.
    
 0.919
RSPH4A
Radial spoke head protein 4 A.
   
 
 0.914
RSPH1
Radial spoke head 1.
   
 
 0.914
CCDC40
Coiled-coil domain-containing protein 40.
   
 
 0.910
ARMC4
Armadillo repeat-containing protein 4.
   
 
 0.905
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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