Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C12orf10UPF0160 protein MYG1, mitochondrial. (311 aa)    
Predicted Functional Partners:
HMG20A
High mobility group protein 20A.
   
   0.795
PFDN5
Prefoldin subunit 5.
   
  
 0.766
HIBCH
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
    
   0.719
C12orf65
Putative peptide chain release factor C12orf65, mitochondrial.
    
   0.718
ACOT9
Acyl-coenzyme A thioesterase 9, mitochondrial.
   
   0.687
C11orf49
UPF0705 protein C11orf49.
      
 0.687
MFSD5
Molybdate-anion transporter.
      
 0.667
NDUFS8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
   
    0.624
NDUFS2
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial; Belongs to the complex I 49 kDa subunit family.
   
    0.620
LHPP
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.
    
   0.618
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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