Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FRMD4AFERM domain-containing protein 4A. (1047 aa)    
Predicted Functional Partners:
TMEM150A
Transmembrane protein 150A.
      
 0.713
RNF144B
RBR-type E3 ubiquitin transferase.
      
 0.664
PLEKHA5
Pleckstrin y domain-containing family A member 5.
    
 
 0.595
STK35
Serine/threonine-protein kinase 35; Belongs to the protein kinase superfamily.
      
 0.588
PDIK1L
Serine/threonine-protein kinase PDIK1L; Belongs to the protein kinase superfamily.
      
 0.588
ABHD15
Abhydrolase domain-containing protein 15.
      
 0.586
PIPOX
Peroxisomal sarcosine oxidase.
      
 0.566
SH3BGRL
SH3 domain-binding glutamic acid-rich-like protein.
      
 0.566
RNF157
RING finger protein 157.
      
 0.565
AANAT
Serotonin N-acetyltransferase.
      
 0.544
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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