STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD4AFERM domain-containing protein 4A. (1047 aa)    
Predicted Functional Partners:
RNF144B
RBR-type E3 ubiquitin transferase.
      
 0.525
STK35
Serine/threonine-protein kinase 35; Belongs to the protein kinase superfamily.
      
 0.499
PDIK1L
Serine/threonine-protein kinase PDIK1L; Belongs to the protein kinase superfamily.
      
 0.499
PLEKHA5
Pleckstrin y domain-containing family A member 5.
    
 
 0.478
CYTH4
Cytohesin-4.
    
 
 0.477
SH3BGRL
SH3 domain-binding glutamic acid-rich-like protein.
      
 0.469
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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