STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF18Rho guanine nucleotide exchange factor 18. (1107 aa)    
Predicted Functional Partners:
RHOA
Transforming protein RhoA.
   
 0.974
EPB41L4B
Band 4.1-like protein 4B.
     
 0.913
PATJ
InaD-like protein.
   
 0.911
STK11
Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily.
     
 0.909
RHOC
Rho-related GTP-binding protein RhoC.
   
 0.753
RHOB
Rho-related GTP-binding protein RhoB.
   
 0.753
CDC42BPB
Serine/threonine-protein kinase MRCK beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.646
CGN
Cingulin.
     
 0.626
ITSN2
Intersectin-2.
    
0.602
ITSN1
Intersectin-1.
    
0.575
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.