Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000004967annotation not available (197 aa)    
Predicted Functional Partners:
ENSLSDP00000008068
annotation not available
   
 0.967
MRPL1
39S ribosomal protein L1, mitochondrial.
  
 0.962
MRPL24
39S ribosomal protein L24, mitochondrial.
  
 0.961
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.956
MRPL13
39S ribosomal protein L13, mitochondrial.
  
 0.952
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 
 0.950
MRPL22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
  
 0.950
MRPL15
39S ribosomal protein L15, mitochondrial.
  
 0.949
MRPL9
39S ribosomal protein L9, mitochondrial.
  
 
 0.945
MRPL2
39S ribosomal protein L2, mitochondrial.
  
 0.942
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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