STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF19PHD finger protein 19. (597 aa)    
Predicted Functional Partners:
KDM6A
Lysine-specific demethylase 6A.
    
 0.963
KDM6B
Lysine-specific demethylase 6B.
    
 0.963
EZH1
Histone-lysine N-methyltransferase EZH1.
   
 0.909
SUZ12
Polycomb protein SUZ12.
   
 0.899
JARID2
Protein Jumonji.
    
 0.869
INTS1
Integrator complex subunit 1.
    
 0.861
INTS3
Integrator complex subunit 3.
    
 0.854
EED
Polycomb protein EED.
   
 0.853
RBBP4
Histone-binding protein RBBP4.
   
 0.811
EZH2
Histone-lysine N-methyltransferase EZH2.
   
 0.804
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.