STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMTF1Cyclin-D-binding Myb-like transcription factor 1. (767 aa)    
Predicted Functional Partners:
TWISTNB
DNA-directed RNA polymerase I subunit RPA43.
    
 0.610
POLR1E
DNA-directed RNA polymerase I subunit RPA49.
    
 0.597
ARMC1
Armadillo repeat-containing protein 1.
      
 0.592
POLR1C
DNA-directed RNA polymerases I and III subunit RPAC1.
    
  0.584
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.572
CAVIN1
Polymerase I and transcript release factor.
    
 0.548
RUNDC3B
RUN domain-containing protein 3B.
      
 0.545
LOC110471003
Cyclin-dependent kinase 7.
   
 
  0.517
MNAT1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
   
 
  0.516
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
     
 0.516
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (12%) [HD]