Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARMC1 | DMTF1 | ENSLSDP00000020065 | ENSLSDP00000005034 | Armadillo repeat-containing protein 1. | Cyclin-D-binding Myb-like transcription factor 1. | 0.592 |
CAVIN1 | DMTF1 | ENSLSDP00000009015 | ENSLSDP00000005034 | Polymerase I and transcript release factor. | Cyclin-D-binding Myb-like transcription factor 1. | 0.548 |
DMTF1 | ARMC1 | ENSLSDP00000005034 | ENSLSDP00000020065 | Cyclin-D-binding Myb-like transcription factor 1. | Armadillo repeat-containing protein 1. | 0.592 |
DMTF1 | CAVIN1 | ENSLSDP00000005034 | ENSLSDP00000009015 | Cyclin-D-binding Myb-like transcription factor 1. | Polymerase I and transcript release factor. | 0.548 |
DMTF1 | LOC110471003 | ENSLSDP00000005034 | ENSLSDP00000005457 | Cyclin-D-binding Myb-like transcription factor 1. | Cyclin-dependent kinase 7. | 0.517 |
DMTF1 | MNAT1 | ENSLSDP00000005034 | ENSLSDP00000018245 | Cyclin-D-binding Myb-like transcription factor 1. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | 0.516 |
DMTF1 | POLR1B | ENSLSDP00000005034 | ENSLSDP00000022581 | Cyclin-D-binding Myb-like transcription factor 1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.572 |
DMTF1 | POLR1C | ENSLSDP00000005034 | ENSLSDP00000005911 | Cyclin-D-binding Myb-like transcription factor 1. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.584 |
DMTF1 | POLR1E | ENSLSDP00000005034 | ENSLSDP00000012790 | Cyclin-D-binding Myb-like transcription factor 1. | DNA-directed RNA polymerase I subunit RPA49. | 0.597 |
DMTF1 | POLR2E | ENSLSDP00000005034 | ENSLSDP00000020942 | Cyclin-D-binding Myb-like transcription factor 1. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.516 |
DMTF1 | RUNDC3B | ENSLSDP00000005034 | ENSLSDP00000006540 | Cyclin-D-binding Myb-like transcription factor 1. | RUN domain-containing protein 3B. | 0.545 |
DMTF1 | TWISTNB | ENSLSDP00000005034 | ENSLSDP00000002835 | Cyclin-D-binding Myb-like transcription factor 1. | DNA-directed RNA polymerase I subunit RPA43. | 0.610 |
LOC110471003 | DMTF1 | ENSLSDP00000005457 | ENSLSDP00000005034 | Cyclin-dependent kinase 7. | Cyclin-D-binding Myb-like transcription factor 1. | 0.517 |
LOC110471003 | MNAT1 | ENSLSDP00000005457 | ENSLSDP00000018245 | Cyclin-dependent kinase 7. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | 0.999 |
LOC110471003 | POLR1B | ENSLSDP00000005457 | ENSLSDP00000022581 | Cyclin-dependent kinase 7. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.797 |
LOC110471003 | POLR1C | ENSLSDP00000005457 | ENSLSDP00000005911 | Cyclin-dependent kinase 7. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.879 |
LOC110471003 | POLR2E | ENSLSDP00000005457 | ENSLSDP00000020942 | Cyclin-dependent kinase 7. | DNA-directed RNA polymerases I, II, and III subunit RPABC1. | 0.873 |
MNAT1 | DMTF1 | ENSLSDP00000018245 | ENSLSDP00000005034 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | Cyclin-D-binding Myb-like transcription factor 1. | 0.516 |
MNAT1 | LOC110471003 | ENSLSDP00000018245 | ENSLSDP00000005457 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | Cyclin-dependent kinase 7. | 0.999 |
MNAT1 | POLR1B | ENSLSDP00000018245 | ENSLSDP00000022581 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.856 |
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