Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM241Transmembrane protein 241. (120 aa)    
Predicted Functional Partners:
RIOK2
Serine/threonine-protein kinase RIO2.
      
 0.678
ANKRD29
Ankyrin repeat domain-containing protein 29.
      
 0.677
SLC35E4
Solute carrier family 35 member E4.
      
 0.677
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 
 0.662
THOC1
THO complex subunit 1.
      
 0.581
MLLT11
Protein AF1q.
      
 0.569
MRPL21
39S ribosomal protein L21, mitochondrial.
      
 0.568
TMEM144
Transmembrane protein 144.
      
 0.568
CDH22
Cadherin-22; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.552
GREB1L
GREB1-like protein.
      
 0.534
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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