Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000005058annotation not available (138 aa)    
Predicted Functional Partners:
COG3
Conserved oligomeric Golgi complex subunit 3.
   
 0.987
COG7
Conserved oligomeric Golgi complex subunit 7.
   
 0.986
COG2
Conserved oligomeric Golgi complex subunit 2.
   
 0.986
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.982
COG4
Conserved oligomeric Golgi complex subunit 4.
   
 0.982
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.977
ENSLSDP00000020490
annotation not available
   
 0.944
COG5
Conserved oligomeric Golgi complex subunit 5.
   
 0.944
SMIM7
Small integral membrane protein 7.
   
 0.865
STX16
Syntaxin-16; Belongs to the syntaxin family.
   
 
 0.841
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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