STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF9Tumor necrosis factor receptor superfamily member 9. (495 aa)    
Predicted Functional Partners:
NIPBLB
Nipped-B-like protein B; Belongs to the tumor necrosis factor family.
    
 0.981
ENSLSDP00000004644
annotation not available
    
   0.757
CD247
CD247 molecule.
      
 0.659
TRAF1
TNF receptor associated factor 1.
   
 
 0.646
TRAF2
TNF receptor-associated factor.
   
 
 0.646
CD86
T-lymphocyte activation antigen CD86.
  
  
 0.644
CD80
T-lymphocyte activation antigen CD80.
   
 
 0.644
LOC110471097
Inducible T-cell costimulator.
   
  
 0.581
TBCCD1
TBCC domain-containing protein 1.
      
 0.563
ENSLSDP00000002409
CD276 antigen-like.
      
 0.561
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.