Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSNGelsolin. (778 aa)    
Predicted Functional Partners:
SCIN
Adseverin.
  
  
0.902
PIP5K1B
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta.
     
 0.901
PIP5K1C
Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma.
     
  0.900
PIKFYVE
1-phosphatidylinositol 3-phosphate 5-kinase.
     
  0.900
PIP4K2A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.
     
  0.900
PIP5K1A
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha.
     
  0.900
WASL
Neural Wiskott-Aldrich syndrome protein.
    
 
 0.878
DBN1
Drebrin.
   
 
 0.856
CASP3
Caspase-3; Belongs to the peptidase C14A family.
    
 0.842
RBM18
Putative RNA-binding protein 18.
    
   0.752
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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