STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO47F-box only protein 47. (464 aa)    
Predicted Functional Partners:
FBXO11
F-box only protein 11.
   
  
 0.679
C1orf109
Uncharacterized protein C1orf109.
   
    0.564
NAGK
N-acetyl-D-glucosamine kinase.
   
  
 0.519
M1AP
Meiosis 1 arrest protein.
   
  
 0.519
DYDC1
DPY30 domain-containing protein 2.
      
 0.517
HAUS8
HAUS augmin-like complex subunit 8.
      
 0.489
CALHM4
Protein FAM26D.
   
    0.459
CALHM2
Calcium homeostasis modulator protein 2.
   
    0.459
SPO11
Meiotic recombination protein SPO11.
   
  
 0.448
CUNH5orf22
UPF0489 protein C5orf22.
   
    0.422
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.