STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP3Vesicle-associated membrane protein 3. (153 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.984
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.980
ITSN2
Intersectin-2.
     
 0.955
GAK
Cyclin-G-associated kinase.
   
 
  0.939
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.935
STX2
Syntaxin-2; Belongs to the syntaxin family.
    
 0.928
LOC110476678
Syntaxin-1B; Belongs to the syntaxin family.
    
 0.928
STX3
Syntaxin-3; Belongs to the syntaxin family.
    
 0.928
STX1A
Syntaxin-1A; Belongs to the syntaxin family.
    
 0.928
STX6
Syntaxin-6; Belongs to the syntaxin family.
    
 0.921
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.