STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain small subunit 1. (130 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
   
 0.851
CAPN7
Calpain-7; Belongs to the peptidase C2 family.
   
 0.801
CAPN15
Calpain-15; Belongs to the peptidase C2 family.
   
 0.658
CAPN5
Calpain-5; Belongs to the peptidase C2 family.
   
 0.623
CAPN6
Calpain-5; Belongs to the peptidase C2 family.
   
 0.623
ENSLSDP00000016618
annotation not available
   
 0.623
LOC110483833
Calpain-2 catalytic subunit; Belongs to the peptidase C2 family.
   
 0.622
CAPN2_0
Calpain-2 catalytic subunit; Belongs to the peptidase C2 family.
   
 0.622
CAPN1
Calpain-1 catalytic subunit; Belongs to the peptidase C2 family.
   
 0.622
ENSLSDP00000008130
annotation not available
   
 0.622
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.