Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRPF19Pre-mRNA-processing factor 19. (504 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5-like protein.
   
 0.999
PLRG1
Pleiotropic regulator 1.
   
0.998
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.997
CTNNBL1
Beta-catenin-like protein 1.
   
 0.997
AQR
Intron-binding protein aquarius.
    
 0.995
ZNF830
Zinc finger protein 830.
    
 0.995
CWC15
Spliceosome-associated protein CWC15.
    
 0.993
PPIE
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
 0.991
ISY1
Pre-mRNA-splicing factor ISY1.
    
 0.989
BCAS2
Pre-mRNA-splicing factor SPF27.
   
 0.988
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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