STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN21Tyrosine-protein phosphatase non-receptor type 21. (1219 aa)    
Predicted Functional Partners:
PTS
6-pyruvoyltetrahydropterin synthase.
    
 
 0.531
FBXO42
F-box only protein 42.
      
 0.457
PTPN23
Tyrosine-protein phosphatase non-receptor type 23.
   
0.439
WWTR1
WW domain-containing transcription regulator protein 1.
   
 
 0.418
MET
Hepatocyte growth factor receptor.
    
 0.418
YAP1
Transcriptional coactivator YAP1.
   
 
 0.418
MST1R
Macrophage-stimulating protein receptor.
    
 0.418
MTSS1
Metastasis suppressor protein 1.
    
 0.412
GRB2
Growth factor receptor-bound protein 2.
   
 0.411
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
   0.402
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.