Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ESCO1N-acetyltransferase ESCO1. (851 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein.
   
 0.988
PDS5A
Sister chromatid cohesion protein PDS5 A.
   
 0.960
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.955
WAPL
Wings apart-like.
   
 
 0.940
PDS5B
Sister chromatid cohesion protein PDS5 B.
   
 0.930
CHTF18
Chromosome transmission fidelity protein 18.
   
 
 0.925
ATAD5
ATPase family AAA domain-containing protein 5.
   
 0.884
DDX11
Putative ATP-dependent RNA helicase DDX11-like protein 8.
   
 
 0.884
WDHD1
WD repeat and HMG-box DNA-binding protein 1.
   
 
 0.873
SMC1A
Structural maintenance of chromosomes protein 1A.
   
 0.869
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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