Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000005170annotation not available (203 aa)    
Predicted Functional Partners:
ALCAM
CD166 antigen.
    
 0.985
CD5
T-cell differentiation antigen CD6.
  
 
 0.894
CD2
T-cell surface antigen CD2.
   
 0.744
CD247
CD247 molecule.
   
 
 0.706
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 
 0.653
LOC110470410
T-cell surface glycoprotein CD3 gamma chain.
   
 0.597
PTPRJ
Receptor-type tyrosine-protein phosphatase eta.
    
 0.588
SH2D1A
SH2 domain-containing protein 1A.
   
 
 0.587
APMAP
Adipocyte plasma membrane-associated protein.
      
 0.572
LOC110473730
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like.
      
 0.547
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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