STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000005170annotation not available (203 aa)    
Predicted Functional Partners:
CD5
T-cell differentiation antigen CD6.
  
 
 0.863
ALCAM
CD166 antigen.
    
 0.852
CD2
T-cell surface antigen CD2.
   
 0.762
CD247
CD247 molecule.
   
 
 0.628
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 
 0.614
LCP2
Lymphocyte cytosolic protein 2.
   
 0.557
SH2D1A
SH2 domain-containing protein 1A.
   
 
 0.552
LOC110470410
T-cell surface glycoprotein CD3 gamma chain.
   
 0.542
CD4
T-cell surface glycoprotein CD4.
   
  
 0.506
ENSLSDP00000007978
T-cell surface glycoprotein CD7.
   
  
 0.478
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.