STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000005178annotation not available (137 aa)    
Predicted Functional Partners:
ENSLSDP00000015650
annotation not available
    
 0.729
TNR
Tenascin-R.
    
 0.729
TNC
Tenascin.
    
 0.729
LRIT1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.650
LRIT3
Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family.
    
 0.650
EGFLAM
Pikachurin.
    
 0.621
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
   
 0.595
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.586
GAS7
Growth arrest-specific protein 7.
    
 0.565
TMED2
Transmembrane emp24 domain-containing protein 2.
     
 0.561
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (48%) [HD]