STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB48Zinc finger and BTB domain-containing protein 48. (516 aa)    
Predicted Functional Partners:
NOL9
Polynucleotide 5'-hydroxyl-kinase NOL9.
      
 0.592
NAIF1
Nuclear apoptosis-inducing factor 1.
   
  
 0.562
DCLRE1B
5' exonuclease Apollo.
    
 
 0.532
CPTP
Ceramide-1-phosphate transfer protein.
      
 0.516
STK11IP
Serine/threonine-protein kinase 11-interacting protein.
   
    0.512
SRBD1
S1 RNA-binding domain-containing protein 1.
    
 
 0.477
PAX7
Paired box protein Pax-7.
    
 0.463
PAX3
Paired box protein Pax-3.
    
 0.463
TAS1R1
Taste receptor type 1 member 1.
      
 0.412
NR2C2
Nuclear receptor subfamily 2 group C member 2.
    
 0.405
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.