Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC8Tetratricopeptide repeat protein 8. (513 aa)    
Predicted Functional Partners:
BBS2
Bardet-Biedl syndrome 2 protein homolog.
  
 
 0.999
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
  
 0.999
BBS9
Protein PTHB1.
    
 0.998
LZTFL1
Leucine zipper transcription factor-like protein 1.
    
 0.985
BBS5
Bardet-Biedl syndrome 5.
  
 
 0.984
BBS4
Bardet-Biedl syndrome 4 protein.
    
 0.980
KLHL41
Kelch-like protein 41.
    
 0.962
KLHL40
Kelch-like protein 40.
    
 0.901
BBIP1
BBSome-interacting protein 1.
    
 0.884
TECTB
Beta-tectorin.
      
 0.873
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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