STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF25Tumor necrosis factor receptor superfamily member 25. (473 aa)    
Predicted Functional Partners:
TRADD
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.764
RIPK1
Receptor-interacting serine/threonine-protein kinase 1.
   
 0.751
TNFAIP3
Tumor necrosis factor alpha-induced protein 3.
    
 0.694
RBCK1
RanBP-type and C3HC4-type zinc finger-containing protein 1-like.
    
 0.693
DAPK1
Death-associated protein kinase 1.
    
 
 0.673
LGR5
Leucine-rich repeat-containing G protein-coupled receptor 5.
      
 0.671
ENSLSDP00000003383
Tumor necrosis factor superfamily, member 2.
    
 0.666
RND3
Rho-related GTP-binding protein RhoE.
    
 0.605
LOC110475163
Ubiquitin carboxyl-terminal hydrolase CYLD; Belongs to the peptidase C19 family.
    
 0.602
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD; Belongs to the peptidase C19 family.
    
 0.602
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.