STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT7Synaptotagmin-7. (684 aa)    
Predicted Functional Partners:
VAMP7
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
     
 0.689
ITSN2
Intersectin-2.
     
 0.683
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.633
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.631
RIMS2
Regulating synaptic membrane exocytosis protein 2.
     
0.542
RAB3A
Ras-related protein Rab-3A.
   
 0.502
RAB3B
Ras-related protein Rab-3B.
   
 0.502
RAB3C
Ras-related protein Rab-3C.
   
 0.502
ITSN1
Intersectin-1.
     
 0.478
STON2
Stonin-2; Belongs to the Stoned B family.
   
 0.457
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.