STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4139S ribosomal protein L41, mitochondrial. (135 aa)    
Predicted Functional Partners:
MRPS12
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.993
MRPL23
39S ribosomal protein L23, mitochondrial.
   
 
 0.993
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.992
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.992
MRPL11
39S ribosomal protein L11, mitochondrial.
   
 0.990
MRPL36
39S ribosomal protein L36, mitochondrial.
   
 
 0.989
MRPL19
39S ribosomal protein L19, mitochondrial.
   
 
 0.988
DAP3
28S ribosomal protein S29, mitochondrial.
    
 
 0.987
MRPL43
39S ribosomal protein L43, mitochondrial.
   
 
 0.986
MRPL30
39S ribosomal protein L30, mitochondrial.
   
 
 0.986
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.