Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
TTLL11Tubulin polyglutamylase TTLL11. (207 aa)    
Predicted Functional Partners:
ENSLSDP00000005278
annotation not available
 
      0.634
FBXW2
F-box/WD repeat-containing protein 2.
      
 0.575
TTLL5
Tubulin polyglutamylase TTLL5.
      
 0.568
PSMD5
26S proteasome non-ATPase regulatory subunit 5.
      
 0.546
RAB14
Ras-related protein Rab-14.
      
 0.531
POC5
Centrosomal protein POC5.
      
 0.525
ARMC9
LisH domain-containing protein ARMC9.
      
 0.469
TTLL12
Tubulin--tyrosine ligase-like protein 12.
      
 0.457
CRB1
Protein crumbs 1.
      
 0.451
PTGS1
Prostaglandin G/H synthase 1.
   
  
 0.451
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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