STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110477658Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. (636 aa)    
Predicted Functional Partners:
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.672
LOC110478952
Torsin-1A-interacting protein 2.
      
 0.672
PLEKHG1
Pleckstrin y domain-containing family G member 1.
      
 0.672
UTRN
Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
      
 0.668
DMD
Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
      
 0.668
DRP2
Dystrophin-related protein 2.
      
 0.668
WTIP
Wilms tumor protein 1-interacting.
    
 
 0.591
LPP
Lipoma-preferred partner.
    
 
 0.591
LIMD1
LIM domain-containing protein 1.
    
 
 0.591
ZYX
Zyxin.
    
 
 0.591
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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