STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLGN2Neuroligin-2. (586 aa)    
Predicted Functional Partners:
MDGA1
MAM domain-containing glycosylphosphatidylinositol anchor protein 1.
   
 0.660
NRXN1
Neurexin-1.
    
 0.652
MDGA2
MAM domain-containing glycosylphosphatidylinositol anchor protein 2.
   
 0.590
ENSLSDP00000004177
annotation not available
    
 0.574
NRXN3
Neurexin-3.
    
 0.574
ENSLSDP00000004589
annotation not available
    
 0.574
UTP20
Small subunit processome component 20.
   
 0.550
WDR43
WD repeat-containing protein 43.
   
 0.540
NRXN3-2
Neurexin 3.
    
 0.534
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.519
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.