STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RECKReversion-inducing cysteine-rich protein with Kazal motifs. (893 aa)    
Predicted Functional Partners:
PDCD4
Programmed cell death protein 4.
      
 0.623
TSPAN12
Tetraspanin.
      
 0.579
PRDM2
PR domain zinc finger protein 2.
      
 0.548
BRCA2
Breast cancer type 2 susceptibility.
      
 0.548
PRDM1
PR domain zinc finger protein 1.
      
 0.518
BRCA1
Breast cancer type 1 susceptibility.
      
 0.454
TIMP3
Metalloproteinase inhibitor 3.
   
 
 0.447
TIMP2
Metalloproteinase inhibitor 2.
   
 
 0.446
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.