Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDCLPhosducin-like protein. (300 aa)    
Predicted Functional Partners:
CCT7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
 0.896
GNB1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
   
 0.888
GNB4
G protein subunit beta 4.
   
 0.888
CCT5
T-complex protein 1 subunit epsilon.
    
 0.880
GNB5
Guanine nucleotide-binding protein subunit beta-5.
   
 0.879
CCT3
T-complex protein 1 subunit gamma.
    
 0.870
CCT2
T-complex protein 1 subunit beta.
    
 0.847
GNB3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
   
 0.828
TCP1
T-complex protein 1 subunit alpha.
    
 0.804
CCT4
T-complex protein 1 subunit delta.
    
 0.773
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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