STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBPC2Myosin-binding protein C, fast-type. (760 aa)    
Predicted Functional Partners:
WDR18
WD repeat-containing protein 18.
   
 0.605
MYL1
Myosin light chain 1, skeletal muscle isoform.
   
 0.586
ACTN2
Alpha-actinin-2.
   
 0.554
TEX10
Testis-expressed sequence 10.
   
 0.549
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.546
MYL3
Myosin light chain 1, cardiac muscle.
   
 0.520
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.518
TNNI2
Troponin I, fast skeletal muscle.
   
 
 0.509
TCAP
Telethonin.
   
 0.503
MYL4
Myosin light chain, embryonic.
   
 0.494
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.