Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DENND1ADENN domain-containing protein 1A. (1085 aa)    
Predicted Functional Partners:
RAB35
Ras-related protein Rab-35.
    
 0.954
YWHAE
14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
  0.902
MADD
MAP kinase-activating death domain protein.
    
 
 0.759
DENND1B
DENN domain-containing protein 1B.
     
 0.750
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
      
 0.605
AMH
Muellerian-inhibiting factor.
      
 0.599
LOC110471134
Rab proteins geranylgeranyltransferase component A 2.
   
 
  0.585
SUOX
Sulfite oxidase.
      
 0.583
RAB28
Ras-related protein Rab-28.
     
 0.582
DENND10
Protein FAM45A.
   
  
 0.579
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (26%) [HD]