Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANO9Anoctamin. (661 aa)    
Predicted Functional Partners:
RSL1D1
Ribosomal L1 domain-containing protein 1.
      
 0.869
ERI1
3'-5' exoribonuclease 1.
      
 0.802
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.794
TMEM19
Transmembrane protein 19.
      
 0.663
USH1C
Harmonin.
      
 0.584
CAPS2
Calcyphosin-2.
      
 0.583
CDC42
Cell division control protein 42.
      
 0.578
CEP290
Centrosomal protein.
      
 0.577
SAAL1
Protein SAAL1.
      
 0.568
ENSLSDP00000003873
annotation not available
      
 0.566
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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