STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIGIRRSingle Ig IL-1-related receptor. (415 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79.
    
 0.777
MYD88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
    
 0.652
IL18R1
Interleukin-18 receptor 1.
   
 
0.600
TLR5
Toll-like receptor 5.
   
 0.534
IRAK2
Interleukin-1 receptor-associated kinase-like 2.
   
 0.526
TOLLIP
Toll-interacting protein.
      
 0.525
LOC110478774
E3 SUMO-protein ligase RanBP2.
    
 0.522
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.508
TLR4
Toll-like receptor 4; Belongs to the Toll-like receptor family.
    
 0.507
KDM6A
Lysine-specific demethylase 6A.
    
 0.456
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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