STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COX8BCytochrome c oxidase subunit 8B, mitochondrial. (63 aa)    
Predicted Functional Partners:
COX6A1
Cytochrome c oxidase subunit 6A1, mitochondrial.
   
 0.982
LOC110482504
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.981
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.975
LOC110474501
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.949
NDUFA4
Cytochrome c oxidase subunit NDUFA4.
   
 0.949
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.948
ENSLSDP00000001112
annotation not available
   
 0.946
LOC110470070
Cytochrome c oxidase subunit 6C-2.
   
 0.946
MT-CO1
Mitochondrially encoded cytochrome c oxidase I.
    
 0.927
LOC110483970
Cytochrome c oxidase subunit 7A2, mitochondrial.
   
 0.927
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.