Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110476208Macrophage mannose receptor 1-like. (1448 aa)    
Predicted Functional Partners:
ECM1
Extracellular matrix protein 1.
     
 0.561
PRL
Prolactin.
      
 0.510
SLC15A2
Solute carrier family 15 member 2.
      
 0.471
C1QA
Complement C1q subcomponent subunit A.
   
 0.450
TNR
Tenascin-R.
   
  0.448
TNC
Tenascin.
   
  0.448
ENSLSDP00000015650
annotation not available
    
  0.447
CD86
T-lymphocyte activation antigen CD86.
   
 
 0.446
IL10
Interleukin-10.
   
 
 0.432
C1QB
Complement C1q subcomponent subunit B.
   
 0.421
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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