Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GOLGA1Golgin subfamily A member 1. (803 aa)    
Predicted Functional Partners:
EXTL3
Exostosin-like 3; Belongs to the glycosyltransferase 47 family.
      
 0.539
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.527
TMF1
TATA element modulatory factor.
     
 0.487
GOLGA2
Golgin subfamily A member 2.
    
 0.439
WDR90
WD repeat-containing protein 90.
   
 0.418
PSPH
Phosphoserine phosphatase.
      
 0.417
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.413
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
   
  0.410
RC3H2
Roquin-2.
      
 0.408
DAGLB
Sn1-specific diacylglycerol lipase beta.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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